View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9795A_low_472 (Length: 204)
Name: NF9795A_low_472
Description: NF9795A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9795A_low_472 |
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Alignment Details
Target: chr5 (Bit Score: 138; Significance: 2e-72; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 929891 - 929746
Alignment:
| Q |
20 |
caaaggtgggaagaaaggtaggaaattctcacatttatcgtgtatggatggatacaatctaatgcattttgctaggtagaaatcaaattatctttgaagg |
119 |
Q |
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| T |
929891 |
caaaggtggtaagaaaggtaggaaattctcacatttatcgtgtatggatggatacaatctaatgcatttttctaggtagaaatcaaattatctttgaagg |
929792 |
T |
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| Q |
120 |
aaactcaatgaatgtaagcggcatagtgtcgcatattaaaatggtt |
165 |
Q |
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| T |
929791 |
aaactcaatgaatgtaagcggcatagtgtcgcatattaaaatggtt |
929746 |
T |
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