View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9795A_low_297 (Length: 244)
Name: NF9795A_low_297
Description: NF9795A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9795A_low_297 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 38932217 - 38932026
Alignment:
| Q |
35 |
ccttattgcttttccccctggtgttccttactggacctacaattacggcaataccccgcttattattgtcactcgcctcgacacttccaataaactaaac |
134 |
Q |
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| T |
38932217 |
ccttattgctattccacctggtgttccttactggacctacaattacggcaatacccctcttattattgtcactctcctcgacacttccaataaactaaac |
38932118 |
T |
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| Q |
135 |
caactcgatcgtatcccaagagtaagcaacattaattataatctaacaattactcctaaatgcaaccaactttgttatatataaatgattca |
226 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
38932117 |
caactcgatcgtatcccaagagtaagcaacattaattataatctaacaattactcctaaatgcaaccaactttgttatatataaatcattca |
38932026 |
T |
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