View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9795A_low_187 (Length: 266)
Name: NF9795A_low_187
Description: NF9795A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9795A_low_187 |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 14 - 260
Target Start/End: Original strand, 43953610 - 43953856
Alignment:
| Q |
14 |
aagaatatggtcaagcctgagtgtggtttaatggcagcggctactaaacaagtgccaagagaaattcatggacggactaacttaagtcaaattgtgttgg |
113 |
Q |
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| T |
43953610 |
aagaatatggtcaagcctgaatgtggtttaatggcggcggctactaaacaagtgccaagagaaattcatggacggactaacttaagtcaaattgtgttgg |
43953709 |
T |
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| Q |
114 |
acacaaacaagtgcatattcgaatggatccaatgagacatatctatccaacaaaaggtggtggttaataaacaagtaccattataattgcccatgctgtt |
213 |
Q |
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| T |
43953710 |
acacaaacaagtgcatattcggatggatccaatgagacatatctatccaacaaaaggtggtggttaataaacaagtaccattataattgcccatgctgtt |
43953809 |
T |
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| Q |
214 |
ggcaaaaaggcaaggagactagcaaagatgtctccaacagtgaggct |
260 |
Q |
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| T |
43953810 |
ggcaaaaaggcaaggagactagcaaagatgtctccaacagtgaggct |
43953856 |
T |
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