View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9219_low_23 (Length: 409)
Name: NF9219_low_23
Description: NF9219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9219_low_23 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 386; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 16 - 409
Target Start/End: Original strand, 7498570 - 7498963
Alignment:
| Q |
16 |
gtttggatattctcgagtaaaattaaatttattttgttctaaactttcaatttcttttgaaggtgcctgaggatttgattgaggcaatcacaaacaagac |
115 |
Q |
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| T |
7498570 |
gtttggatattctcgagtaaaattaaatttattttgttctaaactttcaatttcttttgaaggtgccggaggatttgattgaggcaatcacaaacaagac |
7498669 |
T |
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| Q |
116 |
tgagacaccacctatagtgcatgcagtttcagaaaagaaacatagcactgtcttggaattggaggcttcatttcttaaatactttacaggcattgaatac |
215 |
Q |
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| T |
7498670 |
tgagacaccacctatagtgcatgcagtttcagaaaagaaacatagcactgtcttggaattggaggcttcatttcttaaatactttacaggcattgaatac |
7498769 |
T |
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| Q |
216 |
aactccaagaatctgaaaacatacaacatctttgatagtgaccatgacttcgaaaattgttatggttggacctcgacagtcaccaaaaagcaactaaaac |
315 |
Q |
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| T |
7498770 |
aactccaagaatctgaaaacatacaacatctttgatagtgaccatgacttcgaaaattgttatggttggacctcaacagtcaccaaaaagcaactaaaac |
7498869 |
T |
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| Q |
316 |
gattgaagagtaacaacattggatttctcatggtgaatttgaccagggtcagtgaccatatcataatttcattattagttaaagttataacttt |
409 |
Q |
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| T |
7498870 |
gattgaagagtaacaacattggatttctcatggtgaatttgaccagggtcagtgaccatatcataatttcattattagttaaagttataacttt |
7498963 |
T |
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